I did some other troubleshooting, so far I haven't had much luck. CPU and RAM utilization doesn't spike or show any indication of the system being taxed. The fleet process doesn't go beyond 7% CPU utilization. mysqld and redis sit at around 2% and .3% utilization, respectively while the query is running.
No errors in the redis-server.log file. No errors in the mysql error.log file.
I looked at the fleet logs again and did spot some newer errors - not sure if they are related though:
Mar 10 02
0647 fleetdm sh[1170]: {"cron":"vulnerabilities","err":"msrc sync: remove /tmp/vulndbs/fleet_msrc_Windows_10-2024_03_09.json: no such file or directory","level":"error","msg":"updating msrc definitions","ts":"2024-03-10T02
0647.974147513Z"}
Mar 10 04
4706 fleetdm sh[1170]: {"component":"http","err":"json decoder error","internal":"unexpected EOF","level":"info","path":"/api/v1/osquery/distributed/write","ts":"2024-03-10T04
4706.942060882Z","uuid":"
UUID"}
Mar 11 01
0701 fleetdm sh[1170]: {"cron":"vulnerabilities","err":"msrc sync: remove /tmp/vulndbs/fleet_msrc_Windows_11-2024_03_10.json: no such file or directory","level":"error","msg":"updating msrc definitions","ts":"2024-03-11T01
0701.468887387Z"}
Mar 11 05
2631 fleetdm sh[1170]: {"component":"http","err":"json decoder error","internal":"EOF","level":"info","path":"/api/v1/osquery/distributed/read","ts":"2024-03-11T05
2631.912572452Z","uuid":"
UUID"}
Mar 11 05
5902 fleetdm sh[1170]: {"component":"http","err":"json decoder error","internal":"unexpected EOF","level":"info","path":"/api/v1/osquery/distributed/write","ts":"2024-03-11T05
5902.939625879Z","uuid":"
UUID"}
Mar 11 13
3250 fleetdm sh[1170]: {"component":"http","err":"json decoder error","internal":"EOF","level":"info","path":"/api/v1/osquery/distributed/read","ts":"2024-03-11T13
3250.761276112Z","uuid":"
UUID"}